Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Gm7417-201ENSMUST00000192950 473 ntBASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13-4-dv7A0A075B6C2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13-4-dv7A0A075B6C2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms