Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-5A0A075B6B9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-5A0A075B6B9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6d-5A0A075B6B9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav6d-5A0A075B6B9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6d-5A0A075B6B9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-5A0A075B6B9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-5A0A075B6B9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-5A0A075B6B9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms