Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9d-1A0A075B699 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9d-1A0A075B699 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Serp2-204ENSMUST00000228055 705 ntBASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav9d-1A0A075B699 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav9d-1A0A075B699 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav9d-1A0A075B699 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav9d-1A0A075B699 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Gm9847-201ENSMUST00000052528 599 ntBASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav9d-1A0A075B699 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9d-1A0A075B699 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9d-1A0A075B699 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms