Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12-3A0A075B648 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12-3A0A075B648 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav12-3A0A075B648 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav12-3A0A075B648 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav12-3A0A075B648 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav12-3A0A075B648 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav12-3A0A075B648 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms