Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13-1A0A075B644 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Gm7291-201ENSMUST00000199147 382 ntBASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13-1A0A075B644 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13-1A0A075B644 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Gm27405-201ENSMUST00000184201 112 ntBASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 AV356131-201ENSMUST00000206201 750 ntBASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13-1A0A075B644 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Gm10033-202ENSMUST00000211874 928 ntBASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.48□□□□□ -0.25
Trav13-1A0A075B644 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 AA386476-201ENSMUST00000098781 1665 ntBASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13-1A0A075B644 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms