Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.66□□□□□ -0.22
Trav8-1A0A075B641 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav8-1A0A075B641 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav8-1A0A075B641 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8-1A0A075B641 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav8-1A0A075B641 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8-1A0A075B641 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms