Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav9n-4A0A075B631 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Gm5112-201ENSMUST00000204407 2368 ntBASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9n-4A0A075B631 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-4A0A075B631 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Gm12922-201ENSMUST00000120626 809 ntBASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav9n-4A0A075B631 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Golph3-205ENSMUST00000228671 2842 ntBASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms