Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-5A0A075B621 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-5A0A075B621 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav6n-5A0A075B621 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-5A0A075B621 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav6n-5A0A075B621 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-5A0A075B621 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6n-5A0A075B621 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6n-5A0A075B621 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.77□□□□□ -0.04
Trav6n-5A0A075B621 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6n-5A0A075B621 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6n-5A0A075B621 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6n-5A0A075B621 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6n-5A0A075B621 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6n-5A0A075B621 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6n-5A0A075B621 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6n-5A0A075B621 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-5A0A075B621 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav6n-5A0A075B621 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-5A0A075B621 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-5A0A075B621 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-5A0A075B621 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-5A0A075B621 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6n-5A0A075B621 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6n-5A0A075B621 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6n-5A0A075B621 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6n-5A0A075B621 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-5A0A075B621 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-5A0A075B621 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6n-5A0A075B621 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6n-5A0A075B621 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms