Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Gm13146-201ENSMUST00000118508 780 ntBASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7n-5A0A075B604 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7n-5A0A075B604 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-5A0A075B604 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav7n-5A0A075B604 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.6■□□□□ 0.09
Trav7n-5A0A075B604 AV356131-201ENSMUST00000206201 750 ntBASIC15.6■□□□□ 0.09
Trav7n-5A0A075B604 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Trav7n-5A0A075B604 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav7n-5A0A075B604 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav7n-5A0A075B604 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-5A0A075B604 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-5A0A075B604 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7n-5A0A075B604 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7n-5A0A075B604 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7n-5A0A075B604 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7n-5A0A075B604 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7n-5A0A075B604 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.58■□□□□ 0.09
Trav7n-5A0A075B604 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.58■□□□□ 0.09
Trav7n-5A0A075B604 Gm10849-201ENSMUST00000100397 618 ntBASIC15.58■□□□□ 0.08
Trav7n-5A0A075B604 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav7n-5A0A075B604 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7n-5A0A075B604 Golph3-202ENSMUST00000226517 2359 ntBASIC15.58■□□□□ 0.08
Trav7n-5A0A075B604 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7n-5A0A075B604 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav7n-5A0A075B604 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7n-5A0A075B604 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7n-5A0A075B604 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Gm42569-201ENSMUST00000200539 472 ntBASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7n-5A0A075B604 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.56■□□□□ 0.08
Trav7n-5A0A075B604 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms