Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.84□□□□□ -0.03
Trav9-1A0A075B601 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav9-1A0A075B601 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.84□□□□□ -0.03
Trav9-1A0A075B601 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-1A0A075B601 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav9-1A0A075B601 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-1A0A075B601 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-1A0A075B601 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav9-1A0A075B601 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trav9-1A0A075B601 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav9-1A0A075B601 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav9-1A0A075B601 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav9-1A0A075B601 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav9-1A0A075B601 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-1A0A075B601 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-1A0A075B601 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-1A0A075B601 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-1A0A075B601 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Spcs1-204ENSMUST00000226782 949 ntBASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-1A0A075B601 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms