Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm18688-201ENSMUST00000204695 1859 ntBASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-54A0A075B5W5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.99■□□□□ 0.31
Ighv1-54A0A075B5W5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm15039-201ENSMUST00000118914 875 ntBASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-54A0A075B5W5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm13234-201ENSMUST00000120010 747 ntBASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-54A0A075B5W5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 Gm13146-201ENSMUST00000118508 780 ntBASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-54A0A075B5W5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv1-54A0A075B5W5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv1-54A0A075B5W5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv1-54A0A075B5W5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv1-54A0A075B5W5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv1-54A0A075B5W5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.96■□□□□ 0.3
Ighv1-54A0A075B5W5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Gm18284-201ENSMUST00000172604 624 ntBASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-54A0A075B5W5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms