Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.14■□□□□ 0.65
Trbv4A0A075B5I2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Trbv4A0A075B5I2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.14■□□□□ 0.65
Trbv4A0A075B5I2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv4A0A075B5I2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv4A0A075B5I2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv4A0A075B5I2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trbv4A0A075B5I2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv4A0A075B5I2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv4A0A075B5I2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv4A0A075B5I2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trbv4A0A075B5I2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv4A0A075B5I2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv4A0A075B5I2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.11■□□□□ 0.65
Trbv4A0A075B5I2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv4A0A075B5I2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv4A0A075B5I2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv4A0A075B5I2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv4A0A075B5I2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv4A0A075B5I2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Trbv4A0A075B5I2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv4A0A075B5I2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv4A0A075B5I2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Trbv4A0A075B5I2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv4A0A075B5I2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv4A0A075B5I2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Gm43060-201ENSMUST00000200621 289 ntBASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv4A0A075B5I2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms