Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12728V9GX31 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
Gm12728V9GX31 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm12728V9GX31 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm12728V9GX31 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Gm12728V9GX31 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12728V9GX31 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm12728V9GX31 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12728V9GX31 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm12728V9GX31 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Gm15546-201ENSMUST00000122095 826 ntBASIC15.31■□□□□ 0.04
Gm12728V9GX31 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.31■□□□□ 0.04
Gm12728V9GX31 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm12728V9GX31 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.31■□□□□ 0.04
Gm12728V9GX31 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.3■□□□□ 0.04
Gm12728V9GX31 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Gm5812-201ENSMUST00000061073 957 ntBASIC15.3■□□□□ 0.04
Gm12728V9GX31 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm12728V9GX31 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.29■□□□□ 0.04
Gm12728V9GX31 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm12728V9GX31 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm12728V9GX31 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Gm22238-201ENSMUST00000175222 88 ntBASIC15.28■□□□□ 0.04
Gm12728V9GX31 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Gm9959-201ENSMUST00000068277 390 ntBASIC15.28■□□□□ 0.04
Gm12728V9GX31 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.28■□□□□ 0.04
Gm12728V9GX31 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm12728V9GX31 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm12728V9GX31 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
Gm12728V9GX31 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.27■□□□□ 0.04
Gm12728V9GX31 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12728V9GX31 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12728V9GX31 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Gm12728V9GX31 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12728V9GX31 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.27■□□□□ 0.04
Gm12728V9GX31 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12728V9GX31 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12728V9GX31 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm12728V9GX31 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Gm12728V9GX31 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms