Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb2S4R1M3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 Gm40848-201ENSMUST00000221998 324 ntBASIC19.09■□□□□ 0.65
H2afb2S4R1M3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb2S4R1M3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
H2afb2S4R1M3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
H2afb2S4R1M3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb2S4R1M3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb2S4R1M3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.08■□□□□ 0.64
H2afb2S4R1M3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb2S4R1M3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb2S4R1M3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.08■□□□□ 0.64
H2afb2S4R1M3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb2S4R1M3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb2S4R1M3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb2S4R1M3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb2S4R1M3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
H2afb2S4R1M3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.04■□□□□ 0.64
H2afb2S4R1M3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb2S4R1M3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb2S4R1M3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms