Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Crlf3Q9Z2L7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Gm15039-201ENSMUST00000118914 875 ntBASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crlf3Q9Z2L7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Crlf3Q9Z2L7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Crlf3Q9Z2L7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Crlf3Q9Z2L7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Crlf3Q9Z2L7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crlf3Q9Z2L7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Crlf3Q9Z2L7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Crlf3Q9Z2L7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Crlf3Q9Z2L7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Crlf3Q9Z2L7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Crlf3Q9Z2L7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms