Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rtp4Q9ER80 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rtp4Q9ER80 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtp4Q9ER80 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtp4Q9ER80 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtp4Q9ER80 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtp4Q9ER80 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtp4Q9ER80 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rtp4Q9ER80 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rtp4Q9ER80 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rtp4Q9ER80 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtp4Q9ER80 Gm18671-201ENSMUST00000214826 683 ntBASIC17.87■□□□□ 0.45
Rtp4Q9ER80 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.87■□□□□ 0.45
Rtp4Q9ER80 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.87■□□□□ 0.45
Rtp4Q9ER80 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rtp4Q9ER80 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.87■□□□□ 0.45
Rtp4Q9ER80 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Rtp4Q9ER80 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtp4Q9ER80 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtp4Q9ER80 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.87■□□□□ 0.45
Rtp4Q9ER80 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rtp4Q9ER80 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rtp4Q9ER80 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rtp4Q9ER80 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.86■□□□□ 0.45
Rtp4Q9ER80 Golph3-205ENSMUST00000228671 2842 ntBASIC17.86■□□□□ 0.45
Rtp4Q9ER80 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rtp4Q9ER80 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Rtp4Q9ER80 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rtp4Q9ER80 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtp4Q9ER80 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rtp4Q9ER80 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Gm37179-201ENSMUST00000194862 823 ntBASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Gm42778-201ENSMUST00000199644 553 ntBASIC17.85■□□□□ 0.45
Rtp4Q9ER80 AV356131-201ENSMUST00000206201 750 ntBASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rtp4Q9ER80 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rtp4Q9ER80 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Rtp4Q9ER80 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rtp4Q9ER80 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Gm9988-201ENSMUST00000069786 435 ntBASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtp4Q9ER80 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rtp4Q9ER80 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.82■□□□□ 0.44
Rtp4Q9ER80 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtp4Q9ER80 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtp4Q9ER80 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.82■□□□□ 0.44
Rtp4Q9ER80 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtp4Q9ER80 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtp4Q9ER80 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtp4Q9ER80 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtp4Q9ER80 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtp4Q9ER80 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms