Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cpsf1Q9EPU4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cpsf1Q9EPU4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Cpsf1Q9EPU4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cpsf1Q9EPU4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cpsf1Q9EPU4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cpsf1Q9EPU4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC26.69■■□□□ 1.86
Cpsf1Q9EPU4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cpsf1Q9EPU4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cpsf1Q9EPU4 Gm12441-201ENSMUST00000121806 588 ntBASIC26.68■■□□□ 1.86
Cpsf1Q9EPU4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Cpsf1Q9EPU4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cpsf1Q9EPU4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC26.68■■□□□ 1.86
Cpsf1Q9EPU4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cpsf1Q9EPU4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Cpsf1Q9EPU4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC26.67■■□□□ 1.86
Cpsf1Q9EPU4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cpsf1Q9EPU4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Cpsf1Q9EPU4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cpsf1Q9EPU4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Cpsf1Q9EPU4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC26.67■■□□□ 1.86
Cpsf1Q9EPU4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Golph3-202ENSMUST00000226517 2359 ntBASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Gm7290-201ENSMUST00000104990 617 ntBASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Gm12918-201ENSMUST00000120234 636 ntBASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Gm15710-201ENSMUST00000121821 636 ntBASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Gm5075-201ENSMUST00000196916 622 ntBASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cpsf1Q9EPU4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Cpsf1Q9EPU4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Cpsf1Q9EPU4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cpsf1Q9EPU4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cpsf1Q9EPU4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cpsf1Q9EPU4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cpsf1Q9EPU4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Cpsf1Q9EPU4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cpsf1Q9EPU4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Cpsf1Q9EPU4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Cpsf1Q9EPU4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cpsf1Q9EPU4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
Cpsf1Q9EPU4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC26.63■■□□□ 1.85
Cpsf1Q9EPU4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Cpsf1Q9EPU4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cpsf1Q9EPU4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cpsf1Q9EPU4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cpsf1Q9EPU4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cpsf1Q9EPU4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cpsf1Q9EPU4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cpsf1Q9EPU4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cpsf1Q9EPU4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC26.62■■□□□ 1.85
Cpsf1Q9EPU4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cpsf1Q9EPU4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cpsf1Q9EPU4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cpsf1Q9EPU4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC26.61■■□□□ 1.85
Cpsf1Q9EPU4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC26.61■■□□□ 1.85
Cpsf1Q9EPU4 Gm6211-202ENSMUST00000167849 925 ntBASIC26.61■■□□□ 1.85
Cpsf1Q9EPU4 Gm26971-201ENSMUST00000182423 1072 ntBASIC26.61■■□□□ 1.85
Cpsf1Q9EPU4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC26.61■■□□□ 1.85
Cpsf1Q9EPU4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Cpsf1Q9EPU4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Cpsf1Q9EPU4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC26.59■■□□□ 1.85
Cpsf1Q9EPU4 Gm26524-201ENSMUST00000192339 390 ntBASIC26.59■■□□□ 1.85
Cpsf1Q9EPU4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cpsf1Q9EPU4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
Cpsf1Q9EPU4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
Cpsf1Q9EPU4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Cpsf1Q9EPU4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cpsf1Q9EPU4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cpsf1Q9EPU4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Cpsf1Q9EPU4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cpsf1Q9EPU4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Cpsf1Q9EPU4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms