Protein–RNA interactions for Protein: Q9D7Z6

Clca1, Calcium-activated chloride channel regulator 1, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca1Q9D7Z6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clca1Q9D7Z6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clca1Q9D7Z6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Clca1Q9D7Z6 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.23■□□□□ 0.67
Clca1Q9D7Z6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clca1Q9D7Z6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca1Q9D7Z6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clca1Q9D7Z6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clca1Q9D7Z6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clca1Q9D7Z6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.21■□□□□ 0.67
Clca1Q9D7Z6 Gm43060-201ENSMUST00000200621 289 ntBASIC19.21■□□□□ 0.67
Clca1Q9D7Z6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.21■□□□□ 0.67
Clca1Q9D7Z6 Gm40848-201ENSMUST00000221998 324 ntBASIC19.21■□□□□ 0.67
Clca1Q9D7Z6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Clca1Q9D7Z6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clca1Q9D7Z6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Clca1Q9D7Z6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca1Q9D7Z6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca1Q9D7Z6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Clca1Q9D7Z6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca1Q9D7Z6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clca1Q9D7Z6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca1Q9D7Z6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca1Q9D7Z6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca1Q9D7Z6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clca1Q9D7Z6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca1Q9D7Z6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca1Q9D7Z6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Clca1Q9D7Z6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca1Q9D7Z6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca1Q9D7Z6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca1Q9D7Z6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca1Q9D7Z6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.16■□□□□ 0.66
Clca1Q9D7Z6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clca1Q9D7Z6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Clca1Q9D7Z6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca1Q9D7Z6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca1Q9D7Z6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca1Q9D7Z6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca1Q9D7Z6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca1Q9D7Z6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms