Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bl1Q9D701 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.37■□□□□ 0.37
Upk3bl1Q9D701 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bl1Q9D701 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bl1Q9D701 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Upk3bl1Q9D701 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bl1Q9D701 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bl1Q9D701 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bl1Q9D701 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk3bl1Q9D701 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Gm7143-201ENSMUST00000222811 859 ntBASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.36■□□□□ 0.37
Upk3bl1Q9D701 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.35■□□□□ 0.37
Upk3bl1Q9D701 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Upk3bl1Q9D701 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bl1Q9D701 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bl1Q9D701 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Upk3bl1Q9D701 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bl1Q9D701 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bl1Q9D701 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bl1Q9D701 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk3bl1Q9D701 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.34■□□□□ 0.37
Upk3bl1Q9D701 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bl1Q9D701 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bl1Q9D701 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bl1Q9D701 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bl1Q9D701 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bl1Q9D701 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Upk3bl1Q9D701 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.33■□□□□ 0.36
Upk3bl1Q9D701 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk3bl1Q9D701 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Upk3bl1Q9D701 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk3bl1Q9D701 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Upk3bl1Q9D701 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Upk3bl1Q9D701 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.33■□□□□ 0.36
Upk3bl1Q9D701 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Upk3bl1Q9D701 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk3bl1Q9D701 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Upk3bl1Q9D701 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Gm44487-201ENSMUST00000205145 325 ntBASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.32■□□□□ 0.36
Upk3bl1Q9D701 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 AA386476-201ENSMUST00000098781 1665 ntBASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Upk3bl1Q9D701 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bl1Q9D701 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Upk3bl1Q9D701 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms