Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps33aQ9D2N9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps33aQ9D2N9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps33aQ9D2N9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps33aQ9D2N9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps33aQ9D2N9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps33aQ9D2N9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps33aQ9D2N9 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.28■□□□□ 0.84
Vps33aQ9D2N9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Vps33aQ9D2N9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps33aQ9D2N9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps33aQ9D2N9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps33aQ9D2N9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps33aQ9D2N9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vps33aQ9D2N9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps33aQ9D2N9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps33aQ9D2N9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps33aQ9D2N9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps33aQ9D2N9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vps33aQ9D2N9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps33aQ9D2N9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vps33aQ9D2N9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps33aQ9D2N9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps33aQ9D2N9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps33aQ9D2N9 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.24■□□□□ 0.83
Vps33aQ9D2N9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33aQ9D2N9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33aQ9D2N9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33aQ9D2N9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.24■□□□□ 0.83
Vps33aQ9D2N9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33aQ9D2N9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Vps33aQ9D2N9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33aQ9D2N9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33aQ9D2N9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps33aQ9D2N9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33aQ9D2N9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33aQ9D2N9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33aQ9D2N9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33aQ9D2N9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33aQ9D2N9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.23■□□□□ 0.83
Vps33aQ9D2N9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33aQ9D2N9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.23■□□□□ 0.83
Vps33aQ9D2N9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33aQ9D2N9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps33aQ9D2N9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Vps33aQ9D2N9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33aQ9D2N9 Gm10420-201ENSMUST00000121713 882 ntBASIC20.21■□□□□ 0.83
Vps33aQ9D2N9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33aQ9D2N9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33aQ9D2N9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.21■□□□□ 0.83
Vps33aQ9D2N9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33aQ9D2N9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33aQ9D2N9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vps33aQ9D2N9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms