Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ift27Q9D0P8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift27Q9D0P8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ift27Q9D0P8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift27Q9D0P8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift27Q9D0P8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift27Q9D0P8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ift27Q9D0P8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ift27Q9D0P8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ift27Q9D0P8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift27Q9D0P8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Gm12366-201ENSMUST00000121722 873 ntBASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Gm5786-201ENSMUST00000085368 882 ntBASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ift27Q9D0P8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift27Q9D0P8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms