Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lysmd1Q9D0E3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lysmd1Q9D0E3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.79■□□□□ 0.92
Lysmd1Q9D0E3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 Gm7153-201ENSMUST00000117092 455 ntBASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 Gm18032-201ENSMUST00000222541 538 ntBASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lysmd1Q9D0E3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd1Q9D0E3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd1Q9D0E3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd1Q9D0E3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd1Q9D0E3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.77■□□□□ 0.92
Lysmd1Q9D0E3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd1Q9D0E3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.77■□□□□ 0.92
Lysmd1Q9D0E3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Lysmd1Q9D0E3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd1Q9D0E3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lysmd1Q9D0E3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lysmd1Q9D0E3 Gm12382-201ENSMUST00000122005 922 ntBASIC20.76■□□□□ 0.91
Lysmd1Q9D0E3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lysmd1Q9D0E3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lysmd1Q9D0E3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Lysmd1Q9D0E3 Gm6443-201ENSMUST00000203599 874 ntBASIC20.76■□□□□ 0.91
Lysmd1Q9D0E3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Lysmd1Q9D0E3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Lysmd1Q9D0E3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lysmd1Q9D0E3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lysmd1Q9D0E3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lysmd1Q9D0E3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Lysmd1Q9D0E3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lysmd1Q9D0E3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lysmd1Q9D0E3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lysmd1Q9D0E3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lysmd1Q9D0E3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lysmd1Q9D0E3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Lysmd1Q9D0E3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.74■□□□□ 0.91
Lysmd1Q9D0E3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.74■□□□□ 0.91
Lysmd1Q9D0E3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lysmd1Q9D0E3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lysmd1Q9D0E3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lysmd1Q9D0E3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lysmd1Q9D0E3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.73■□□□□ 0.91
Lysmd1Q9D0E3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Lysmd1Q9D0E3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lysmd1Q9D0E3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lysmd1Q9D0E3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Lysmd1Q9D0E3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lysmd1Q9D0E3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Lysmd1Q9D0E3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Lysmd1Q9D0E3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lysmd1Q9D0E3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Lysmd1Q9D0E3 Gm7860-201ENSMUST00000121190 879 ntBASIC20.72■□□□□ 0.91
Lysmd1Q9D0E3 Gm28033-201ENSMUST00000184224 96 ntBASIC20.72■□□□□ 0.91
Lysmd1Q9D0E3 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.72■□□□□ 0.91
Lysmd1Q9D0E3 Odf3b-204ENSMUST00000227834 930 ntBASIC20.72■□□□□ 0.91
Lysmd1Q9D0E3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lysmd1Q9D0E3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lysmd1Q9D0E3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lysmd1Q9D0E3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lysmd1Q9D0E3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Lysmd1Q9D0E3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Lysmd1Q9D0E3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lysmd1Q9D0E3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lysmd1Q9D0E3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lysmd1Q9D0E3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd1Q9D0E3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.69■□□□□ 0.9
Lysmd1Q9D0E3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd1Q9D0E3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd1Q9D0E3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd1Q9D0E3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd1Q9D0E3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lysmd1Q9D0E3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Lysmd1Q9D0E3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd1Q9D0E3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd1Q9D0E3 Gm17661-201ENSMUST00000170317 270 ntBASIC20.68■□□□□ 0.9
Lysmd1Q9D0E3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd1Q9D0E3 Gm43183-201ENSMUST00000200632 547 ntBASIC20.68■□□□□ 0.9
Lysmd1Q9D0E3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.68■□□□□ 0.9
Lysmd1Q9D0E3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd1Q9D0E3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lysmd1Q9D0E3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lysmd1Q9D0E3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms