Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc3Q9CWU5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc3Q9CWU5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc3Q9CWU5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc3Q9CWU5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.31■□□□□ 0.52
Khdc3Q9CWU5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc3Q9CWU5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.31■□□□□ 0.52
Khdc3Q9CWU5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc3Q9CWU5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc3Q9CWU5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Khdc3Q9CWU5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc3Q9CWU5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.3■□□□□ 0.52
Khdc3Q9CWU5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Khdc3Q9CWU5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc3Q9CWU5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Khdc3Q9CWU5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Khdc3Q9CWU5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc3Q9CWU5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc3Q9CWU5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc3Q9CWU5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Iqck-206ENSMUST00000208658 2891 ntBASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Gm11421-201ENSMUST00000122124 294 ntBASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc3Q9CWU5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Gm43017-201ENSMUST00000198296 752 ntBASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc3Q9CWU5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Khdc3Q9CWU5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Khdc3Q9CWU5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Khdc3Q9CWU5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Khdc3Q9CWU5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Khdc3Q9CWU5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc3Q9CWU5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Khdc3Q9CWU5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc3Q9CWU5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc3Q9CWU5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Khdc3Q9CWU5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.24■□□□□ 0.51
Khdc3Q9CWU5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Khdc3Q9CWU5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms