Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Gm43017-201ENSMUST00000198296 752 ntBASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf135Q9CWS1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf135Q9CWS1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf135Q9CWS1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf135Q9CWS1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf135Q9CWS1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf135Q9CWS1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf135Q9CWS1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf135Q9CWS1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf135Q9CWS1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf135Q9CWS1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Rnf135Q9CWS1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.85■□□□□ 0.77
Rnf135Q9CWS1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf135Q9CWS1 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.85■□□□□ 0.77
Rnf135Q9CWS1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf135Q9CWS1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf135Q9CWS1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf135Q9CWS1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf135Q9CWS1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf135Q9CWS1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf135Q9CWS1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Gm8493-201ENSMUST00000196881 489 ntBASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf135Q9CWS1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf135Q9CWS1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Rnf135Q9CWS1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf135Q9CWS1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rnf135Q9CWS1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.82■□□□□ 0.76
Rnf135Q9CWS1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Rnf135Q9CWS1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf135Q9CWS1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Rnf135Q9CWS1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf135Q9CWS1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf135Q9CWS1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.8■□□□□ 0.76
Rnf135Q9CWS1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf135Q9CWS1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf135Q9CWS1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf135Q9CWS1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms