Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.28■□□□□ 0.68
Fcf1Q9CTH6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.28■□□□□ 0.68
Fcf1Q9CTH6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fcf1Q9CTH6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.28■□□□□ 0.68
Fcf1Q9CTH6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fcf1Q9CTH6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Fcf1Q9CTH6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Fcf1Q9CTH6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fcf1Q9CTH6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fcf1Q9CTH6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fcf1Q9CTH6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fcf1Q9CTH6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Fcf1Q9CTH6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Fcf1Q9CTH6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fcf1Q9CTH6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fcf1Q9CTH6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fcf1Q9CTH6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Fcf1Q9CTH6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Fcf1Q9CTH6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fcf1Q9CTH6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Gm44487-201ENSMUST00000205145 325 ntBASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fcf1Q9CTH6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fcf1Q9CTH6 Gm13146-201ENSMUST00000118508 780 ntBASIC19.24■□□□□ 0.67
Fcf1Q9CTH6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.24■□□□□ 0.67
Fcf1Q9CTH6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Fcf1Q9CTH6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fcf1Q9CTH6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Fcf1Q9CTH6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fcf1Q9CTH6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fcf1Q9CTH6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fcf1Q9CTH6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fcf1Q9CTH6 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.23■□□□□ 0.67
Fcf1Q9CTH6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.23■□□□□ 0.67
Fcf1Q9CTH6 Gm7514-201ENSMUST00000209475 934 ntBASIC19.23■□□□□ 0.67
Fcf1Q9CTH6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Fcf1Q9CTH6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Fcf1Q9CTH6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Fcf1Q9CTH6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fcf1Q9CTH6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fcf1Q9CTH6 Gm37179-201ENSMUST00000194862 823 ntBASIC19.22■□□□□ 0.67
Fcf1Q9CTH6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fcf1Q9CTH6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fcf1Q9CTH6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fcf1Q9CTH6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fcf1Q9CTH6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fcf1Q9CTH6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fcf1Q9CTH6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fcf1Q9CTH6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Fcf1Q9CTH6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fcf1Q9CTH6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fcf1Q9CTH6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Fcf1Q9CTH6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Fcf1Q9CTH6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Fcf1Q9CTH6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.21■□□□□ 0.67
Fcf1Q9CTH6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fcf1Q9CTH6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fcf1Q9CTH6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fcf1Q9CTH6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fcf1Q9CTH6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Fcf1Q9CTH6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Fcf1Q9CTH6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fcf1Q9CTH6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Fcf1Q9CTH6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Fcf1Q9CTH6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.19■□□□□ 0.66
Fcf1Q9CTH6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fcf1Q9CTH6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Fcf1Q9CTH6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms