Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.68■□□□□ 0.58
Trim8Q99PJ2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim8Q99PJ2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Trim8Q99PJ2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim8Q99PJ2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim8Q99PJ2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim8Q99PJ2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim8Q99PJ2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim8Q99PJ2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Trim8Q99PJ2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
Trim8Q99PJ2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim8Q99PJ2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim8Q99PJ2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim8Q99PJ2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim8Q99PJ2 BC021767-201ENSMUST00000126387 1716 ntBASIC18.65■□□□□ 0.58
Trim8Q99PJ2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim8Q99PJ2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim8Q99PJ2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.65■□□□□ 0.58
Trim8Q99PJ2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim8Q99PJ2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.64■□□□□ 0.57
Trim8Q99PJ2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim8Q99PJ2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim8Q99PJ2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim8Q99PJ2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim8Q99PJ2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim8Q99PJ2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim8Q99PJ2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim8Q99PJ2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim8Q99PJ2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim8Q99PJ2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim8Q99PJ2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Trim8Q99PJ2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.61■□□□□ 0.57
Trim8Q99PJ2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms