Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col25a1Q99MQ5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col25a1Q99MQ5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col25a1Q99MQ5 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.9■□□□□ 0.78
Col25a1Q99MQ5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col25a1Q99MQ5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col25a1Q99MQ5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col25a1Q99MQ5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col25a1Q99MQ5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col25a1Q99MQ5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col25a1Q99MQ5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col25a1Q99MQ5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col25a1Q99MQ5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.88■□□□□ 0.77
Col25a1Q99MQ5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col25a1Q99MQ5 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.87■□□□□ 0.77
Col25a1Q99MQ5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col25a1Q99MQ5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col25a1Q99MQ5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col25a1Q99MQ5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.86■□□□□ 0.77
Col25a1Q99MQ5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col25a1Q99MQ5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.86■□□□□ 0.77
Col25a1Q99MQ5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col25a1Q99MQ5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col25a1Q99MQ5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col25a1Q99MQ5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col25a1Q99MQ5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Col25a1Q99MQ5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col25a1Q99MQ5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Col25a1Q99MQ5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.85■□□□□ 0.77
Col25a1Q99MQ5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col25a1Q99MQ5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col25a1Q99MQ5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col25a1Q99MQ5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Col25a1Q99MQ5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col25a1Q99MQ5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col25a1Q99MQ5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Col25a1Q99MQ5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col25a1Q99MQ5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Col25a1Q99MQ5 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.83■□□□□ 0.77
Col25a1Q99MQ5 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.83■□□□□ 0.77
Col25a1Q99MQ5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col25a1Q99MQ5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.83■□□□□ 0.77
Col25a1Q99MQ5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col25a1Q99MQ5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col25a1Q99MQ5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col25a1Q99MQ5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col25a1Q99MQ5 Gm9103-201ENSMUST00000119371 405 ntBASIC19.82■□□□□ 0.76
Col25a1Q99MQ5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.82■□□□□ 0.76
Col25a1Q99MQ5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col25a1Q99MQ5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col25a1Q99MQ5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col25a1Q99MQ5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col25a1Q99MQ5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Gm7461-201ENSMUST00000058918 827 ntBASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col25a1Q99MQ5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Gm5417-201ENSMUST00000079706 384 ntBASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col25a1Q99MQ5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms