Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lysmd3Q99LE3 Gm7860-201ENSMUST00000121190 879 ntBASIC19.86■□□□□ 0.77
Lysmd3Q99LE3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.86■□□□□ 0.77
Lysmd3Q99LE3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd3Q99LE3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd3Q99LE3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd3Q99LE3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd3Q99LE3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd3Q99LE3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
Lysmd3Q99LE3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Lysmd3Q99LE3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Gm29257-201ENSMUST00000186115 639 ntBASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd3Q99LE3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Lysmd3Q99LE3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lysmd3Q99LE3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lysmd3Q99LE3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lysmd3Q99LE3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lysmd3Q99LE3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Lysmd3Q99LE3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lysmd3Q99LE3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lysmd3Q99LE3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lysmd3Q99LE3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lysmd3Q99LE3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lysmd3Q99LE3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lysmd3Q99LE3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lysmd3Q99LE3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Lysmd3Q99LE3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lysmd3Q99LE3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Lysmd3Q99LE3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lysmd3Q99LE3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lysmd3Q99LE3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lysmd3Q99LE3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Lysmd3Q99LE3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lysmd3Q99LE3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.8■□□□□ 0.76
Lysmd3Q99LE3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lysmd3Q99LE3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lysmd3Q99LE3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd3Q99LE3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Lysmd3Q99LE3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd3Q99LE3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd3Q99LE3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lysmd3Q99LE3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms