Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha8Q91Y12 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdha8Q91Y12 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha8Q91Y12 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha8Q91Y12 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha8Q91Y12 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha8Q91Y12 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdha8Q91Y12 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha8Q91Y12 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha8Q91Y12 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha8Q91Y12 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha8Q91Y12 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha8Q91Y12 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha8Q91Y12 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdha8Q91Y12 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdha8Q91Y12 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdha8Q91Y12 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Gm43017-201ENSMUST00000198296 752 ntBASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha8Q91Y12 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha8Q91Y12 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdha8Q91Y12 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Pcdha8Q91Y12 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcdha8Q91Y12 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdha8Q91Y12 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha8Q91Y12 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdha8Q91Y12 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdha8Q91Y12 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdha8Q91Y12 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Pcdha8Q91Y12 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Gm26833-201ENSMUST00000180899 440 ntBASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha8Q91Y12 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha8Q91Y12 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha8Q91Y12 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha8Q91Y12 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdha8Q91Y12 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha8Q91Y12 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.5■□□□□ 0.55
Pcdha8Q91Y12 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha8Q91Y12 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha8Q91Y12 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdha8Q91Y12 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdha8Q91Y12 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha8Q91Y12 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha8Q91Y12 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
Pcdha8Q91Y12 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha8Q91Y12 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdha8Q91Y12 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdha8Q91Y12 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdha8Q91Y12 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha8Q91Y12 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdha8Q91Y12 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms