Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhac1Q91Y10 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhac1Q91Y10 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhac1Q91Y10 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhac1Q91Y10 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Gm43137-201ENSMUST00000198052 594 ntBASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhac1Q91Y10 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhac1Q91Y10 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac1Q91Y10 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac1Q91Y10 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac1Q91Y10 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac1Q91Y10 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac1Q91Y10 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhac1Q91Y10 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhac1Q91Y10 Gm27454-201ENSMUST00000185090 204 ntBASIC17.77■□□□□ 0.44
Pcdhac1Q91Y10 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhac1Q91Y10 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Pcdhac1Q91Y10 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhac1Q91Y10 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhac1Q91Y10 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhac1Q91Y10 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms