Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Gm21956-201ENSMUST00000179946 522 ntBASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Gm13241-201ENSMUST00000094493 780 ntBASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb4Q91XZ6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb4Q91XZ6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Serp2-204ENSMUST00000228055 705 ntBASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb4Q91XZ6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb4Q91XZ6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb4Q91XZ6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb4Q91XZ6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb4Q91XZ6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Pcdhb4Q91XZ6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Spcs1-204ENSMUST00000226782 949 ntBASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb4Q91XZ6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms