Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb8Q91XZ2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb8Q91XZ2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Pcdhb8Q91XZ2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb8Q91XZ2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb8Q91XZ2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb8Q91XZ2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb8Q91XZ2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdhb8Q91XZ2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb8Q91XZ2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb8Q91XZ2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhb8Q91XZ2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdhb8Q91XZ2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb8Q91XZ2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb8Q91XZ2 Gm11421-201ENSMUST00000122124 294 ntBASIC18.61■□□□□ 0.57
Pcdhb8Q91XZ2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb8Q91XZ2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb8Q91XZ2 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.61■□□□□ 0.57
Pcdhb8Q91XZ2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 Gm6139-201ENSMUST00000079261 882 ntBASIC18.6■□□□□ 0.57
Pcdhb8Q91XZ2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb8Q91XZ2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb8Q91XZ2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdhb8Q91XZ2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb8Q91XZ2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb8Q91XZ2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb8Q91XZ2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdhb8Q91XZ2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcdhb8Q91XZ2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb8Q91XZ2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
Pcdhb8Q91XZ2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcdhb8Q91XZ2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb8Q91XZ2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb8Q91XZ2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb8Q91XZ2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
Pcdhb8Q91XZ2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb8Q91XZ2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb8Q91XZ2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhb8Q91XZ2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb8Q91XZ2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb8Q91XZ2 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.57■□□□□ 0.56
Pcdhb8Q91XZ2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb8Q91XZ2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb8Q91XZ2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb8Q91XZ2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb8Q91XZ2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb8Q91XZ2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb8Q91XZ2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb8Q91XZ2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.56■□□□□ 0.56
Pcdhb8Q91XZ2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb8Q91XZ2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb8Q91XZ2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb8Q91XZ2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb8Q91XZ2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb8Q91XZ2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhb8Q91XZ2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb8Q91XZ2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms