Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.74■□□□□ 0.75
Usp3Q91W36 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp3Q91W36 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp3Q91W36 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Usp3Q91W36 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp3Q91W36 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Usp3Q91W36 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp3Q91W36 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp3Q91W36 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp3Q91W36 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp3Q91W36 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp3Q91W36 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Usp3Q91W36 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp3Q91W36 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp3Q91W36 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp3Q91W36 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp3Q91W36 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp3Q91W36 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp3Q91W36 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp3Q91W36 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Usp3Q91W36 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp3Q91W36 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp3Q91W36 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Usp3Q91W36 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp3Q91W36 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp3Q91W36 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.71■□□□□ 0.75
Usp3Q91W36 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp3Q91W36 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.71■□□□□ 0.75
Usp3Q91W36 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.71■□□□□ 0.75
Usp3Q91W36 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp3Q91W36 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Usp3Q91W36 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp3Q91W36 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp3Q91W36 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp3Q91W36 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Usp3Q91W36 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp3Q91W36 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp3Q91W36 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.7■□□□□ 0.74
Usp3Q91W36 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.7■□□□□ 0.74
Usp3Q91W36 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp3Q91W36 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Usp3Q91W36 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp3Q91W36 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp3Q91W36 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp3Q91W36 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp3Q91W36 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp3Q91W36 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp3Q91W36 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp3Q91W36 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Usp3Q91W36 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Usp3Q91W36 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.69■□□□□ 0.74
Usp3Q91W36 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Usp3Q91W36 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp3Q91W36 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp3Q91W36 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp3Q91W36 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.69■□□□□ 0.74
Usp3Q91W36 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp3Q91W36 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Usp3Q91W36 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp3Q91W36 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp3Q91W36 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp3Q91W36 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp3Q91W36 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp3Q91W36 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp3Q91W36 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Usp3Q91W36 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Usp3Q91W36 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Usp3Q91W36 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.67■□□□□ 0.74
Usp3Q91W36 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp3Q91W36 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp3Q91W36 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp3Q91W36 Gm13534-201ENSMUST00000121169 513 ntBASIC19.66■□□□□ 0.74
Usp3Q91W36 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp3Q91W36 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Usp3Q91W36 Gm37179-201ENSMUST00000194862 823 ntBASIC19.66■□□□□ 0.74
Usp3Q91W36 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp3Q91W36 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp3Q91W36 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp3Q91W36 Iqck-206ENSMUST00000208658 2891 ntBASIC19.66■□□□□ 0.74
Usp3Q91W36 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp3Q91W36 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp3Q91W36 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp3Q91W36 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usp3Q91W36 Gm7514-201ENSMUST00000209475 934 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms