Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.94■□□□□ 0.62
Vsx1Q91V10 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx1Q91V10 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx1Q91V10 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx1Q91V10 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx1Q91V10 Gm27275-201ENSMUST00000184318 272 ntBASIC18.94■□□□□ 0.62
Vsx1Q91V10 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx1Q91V10 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Gm26524-201ENSMUST00000192339 390 ntBASIC18.93■□□□□ 0.62
Vsx1Q91V10 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vsx1Q91V10 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Vsx1Q91V10 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vsx1Q91V10 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx1Q91V10 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.92■□□□□ 0.62
Vsx1Q91V10 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx1Q91V10 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx1Q91V10 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vsx1Q91V10 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vsx1Q91V10 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.91■□□□□ 0.62
Vsx1Q91V10 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx1Q91V10 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Vsx1Q91V10 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vsx1Q91V10 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vsx1Q91V10 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vsx1Q91V10 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vsx1Q91V10 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Vsx1Q91V10 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vsx1Q91V10 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vsx1Q91V10 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.89■□□□□ 0.61
Vsx1Q91V10 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.89■□□□□ 0.61
Vsx1Q91V10 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.89■□□□□ 0.61
Vsx1Q91V10 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vsx1Q91V10 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vsx1Q91V10 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx1Q91V10 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx1Q91V10 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vsx1Q91V10 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Vsx1Q91V10 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx1Q91V10 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.88■□□□□ 0.61
Vsx1Q91V10 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Vsx1Q91V10 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx1Q91V10 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx1Q91V10 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx1Q91V10 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx1Q91V10 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Vsx1Q91V10 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx1Q91V10 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx1Q91V10 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx1Q91V10 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx1Q91V10 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx1Q91V10 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx1Q91V10 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.86■□□□□ 0.61
Vsx1Q91V10 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Vsx1Q91V10 Rab3c-203ENSMUST00000224180 967 ntBASIC18.86■□□□□ 0.61
Vsx1Q91V10 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms