Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cspg4Q8VHY0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cspg4Q8VHY0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg4Q8VHY0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg4Q8VHY0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg4Q8VHY0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cspg4Q8VHY0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cspg4Q8VHY0 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.54■□□□□ 0.24
Cspg4Q8VHY0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cspg4Q8VHY0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.54■□□□□ 0.24
Cspg4Q8VHY0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Cspg4Q8VHY0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.54■□□□□ 0.24
Cspg4Q8VHY0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cspg4Q8VHY0 Gm6659-201ENSMUST00000174752 547 ntBASIC16.52■□□□□ 0.24
Cspg4Q8VHY0 Gm2559-201ENSMUST00000201323 363 ntBASIC16.52■□□□□ 0.24
Cspg4Q8VHY0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cspg4Q8VHY0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cspg4Q8VHY0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cspg4Q8VHY0 Mir1199-201ENSMUST00000117015 119 ntBASIC16.52■□□□□ 0.23
Cspg4Q8VHY0 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.52■□□□□ 0.23
Cspg4Q8VHY0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Cspg4Q8VHY0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cspg4Q8VHY0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cspg4Q8VHY0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cspg4Q8VHY0 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg4Q8VHY0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 AA386476-201ENSMUST00000098781 1665 ntBASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg4Q8VHY0 Gm12896-201ENSMUST00000118430 226 ntBASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg4Q8VHY0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cspg4Q8VHY0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms