Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc71Q8VEG0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc71Q8VEG0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc71Q8VEG0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc71Q8VEG0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc71Q8VEG0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc71Q8VEG0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc71Q8VEG0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc71Q8VEG0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
Ccdc71Q8VEG0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccdc71Q8VEG0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc71Q8VEG0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc71Q8VEG0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc71Q8VEG0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc71Q8VEG0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc71Q8VEG0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccdc71Q8VEG0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc71Q8VEG0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc71Q8VEG0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc71Q8VEG0 Gm12896-201ENSMUST00000118430 226 ntBASIC19.92■□□□□ 0.78
Ccdc71Q8VEG0 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.92■□□□□ 0.78
Ccdc71Q8VEG0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.92■□□□□ 0.78
Ccdc71Q8VEG0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc71Q8VEG0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc71Q8VEG0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc71Q8VEG0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc71Q8VEG0 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.92■□□□□ 0.78
Ccdc71Q8VEG0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc71Q8VEG0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.9■□□□□ 0.78
Ccdc71Q8VEG0 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc71Q8VEG0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc71Q8VEG0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ccdc71Q8VEG0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms