Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndc1Q8VCB1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndc1Q8VCB1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.02■□□□□ 0.47
Ndc1Q8VCB1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.01■□□□□ 0.47
Ndc1Q8VCB1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18■□□□□ 0.47
Ndc1Q8VCB1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ndc1Q8VCB1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ndc1Q8VCB1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndc1Q8VCB1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndc1Q8VCB1 Gm7514-201ENSMUST00000209475 934 ntBASIC17.98■□□□□ 0.47
Ndc1Q8VCB1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.98■□□□□ 0.47
Ndc1Q8VCB1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndc1Q8VCB1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndc1Q8VCB1 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.98■□□□□ 0.47
Ndc1Q8VCB1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.98■□□□□ 0.47
Ndc1Q8VCB1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndc1Q8VCB1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndc1Q8VCB1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndc1Q8VCB1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ndc1Q8VCB1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndc1Q8VCB1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndc1Q8VCB1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms