Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cd109Q8R422 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cd109Q8R422 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Cd109Q8R422 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
Cd109Q8R422 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC27.4■■□□□ 1.98
Cd109Q8R422 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cd109Q8R422 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Cd109Q8R422 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Cd109Q8R422 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Cd109Q8R422 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Cd109Q8R422 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Cd109Q8R422 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cd109Q8R422 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
Cd109Q8R422 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC27.38■■□□□ 1.97
Cd109Q8R422 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Cd109Q8R422 Gm27275-201ENSMUST00000184318 272 ntBASIC27.38■■□□□ 1.97
Cd109Q8R422 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cd109Q8R422 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC27.38■■□□□ 1.97
Cd109Q8R422 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cd109Q8R422 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Cd109Q8R422 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
Cd109Q8R422 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC27.37■■□□□ 1.97
Cd109Q8R422 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Cd109Q8R422 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
Cd109Q8R422 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Cd109Q8R422 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC27.37■■□□□ 1.97
Cd109Q8R422 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cd109Q8R422 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cd109Q8R422 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cd109Q8R422 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC27.36■■□□□ 1.97
Cd109Q8R422 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cd109Q8R422 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cd109Q8R422 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Cd109Q8R422 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cd109Q8R422 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC27.35■■□□□ 1.97
Cd109Q8R422 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Cd109Q8R422 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cd109Q8R422 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Cd109Q8R422 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cd109Q8R422 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cd109Q8R422 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC27.34■■□□□ 1.97
Cd109Q8R422 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Cd109Q8R422 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC27.34■■□□□ 1.97
Cd109Q8R422 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Cd109Q8R422 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Cd109Q8R422 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Cd109Q8R422 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cd109Q8R422 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cd109Q8R422 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cd109Q8R422 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Cd109Q8R422 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC27.33■■□□□ 1.97
Cd109Q8R422 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC27.33■■□□□ 1.97
Cd109Q8R422 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.97
Cd109Q8R422 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cd109Q8R422 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC27.33■■□□□ 1.96
Cd109Q8R422 Gm10252-201ENSMUST00000209541 832 ntBASIC27.33■■□□□ 1.96
Cd109Q8R422 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Cd109Q8R422 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cd109Q8R422 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC27.32■■□□□ 1.96
Cd109Q8R422 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC27.32■■□□□ 1.96
Cd109Q8R422 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cd109Q8R422 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cd109Q8R422 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC27.32■■□□□ 1.96
Cd109Q8R422 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cd109Q8R422 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cd109Q8R422 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Cd109Q8R422 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cd109Q8R422 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC27.31■■□□□ 1.96
Cd109Q8R422 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Cd109Q8R422 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cd109Q8R422 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cd109Q8R422 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cd109Q8R422 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cd109Q8R422 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cd109Q8R422 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cd109Q8R422 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Cd109Q8R422 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Cd109Q8R422 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Cd109Q8R422 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Cd109Q8R422 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Cd109Q8R422 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC27.29■■□□□ 1.96
Cd109Q8R422 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Cd109Q8R422 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Cd109Q8R422 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Cd109Q8R422 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC27.28■■□□□ 1.96
Cd109Q8R422 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC27.28■■□□□ 1.96
Cd109Q8R422 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC27.28■■□□□ 1.96
Cd109Q8R422 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cd109Q8R422 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
Cd109Q8R422 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms