Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Abca3Q8R420 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Abca3Q8R420 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC24.28■■□□□ 1.48
Abca3Q8R420 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Abca3Q8R420 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC24.27■■□□□ 1.48
Abca3Q8R420 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Abca3Q8R420 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Abca3Q8R420 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.27■■□□□ 1.48
Abca3Q8R420 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Abca3Q8R420 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Abca3Q8R420 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Abca3Q8R420 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Abca3Q8R420 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Abca3Q8R420 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Abca3Q8R420 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
Abca3Q8R420 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Abca3Q8R420 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Abca3Q8R420 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Abca3Q8R420 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Abca3Q8R420 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Abca3Q8R420 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Abca3Q8R420 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Abca3Q8R420 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Abca3Q8R420 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Abca3Q8R420 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Abca3Q8R420 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC24.24■■□□□ 1.47
Abca3Q8R420 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Abca3Q8R420 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Abca3Q8R420 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Abca3Q8R420 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC24.24■■□□□ 1.47
Abca3Q8R420 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Abca3Q8R420 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC24.23■■□□□ 1.47
Abca3Q8R420 AC152827.1-201ENSMUST00000221143 2189 ntBASIC24.23■■□□□ 1.47
Abca3Q8R420 Gm11643-201ENSMUST00000119578 864 ntBASIC24.23■■□□□ 1.47
Abca3Q8R420 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC24.23■■□□□ 1.47
Abca3Q8R420 Mir5122-201ENSMUST00000175004 89 ntBASIC24.23■■□□□ 1.47
Abca3Q8R420 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Abca3Q8R420 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Abca3Q8R420 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
Abca3Q8R420 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Abca3Q8R420 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Abca3Q8R420 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Abca3Q8R420 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Abca3Q8R420 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Abca3Q8R420 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
Abca3Q8R420 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Abca3Q8R420 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Abca3Q8R420 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Abca3Q8R420 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Abca3Q8R420 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Abca3Q8R420 Mir1199-201ENSMUST00000117015 119 ntBASIC24.21■■□□□ 1.47
Abca3Q8R420 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Abca3Q8R420 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC24.21■■□□□ 1.47
Abca3Q8R420 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Abca3Q8R420 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Abca3Q8R420 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Abca3Q8R420 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC24.21■■□□□ 1.47
Abca3Q8R420 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Abca3Q8R420 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Abca3Q8R420 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Abca3Q8R420 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Abca3Q8R420 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC24.2■■□□□ 1.46
Abca3Q8R420 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Abca3Q8R420 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC24.2■■□□□ 1.46
Abca3Q8R420 AL672049.1-201ENSMUST00000197943 91 ntBASIC24.2■■□□□ 1.46
Abca3Q8R420 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Abca3Q8R420 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Abca3Q8R420 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Abca3Q8R420 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Abca3Q8R420 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Abca3Q8R420 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Abca3Q8R420 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC24.19■■□□□ 1.46
Abca3Q8R420 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Abca3Q8R420 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Abca3Q8R420 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Abca3Q8R420 AC153881.2-201ENSMUST00000214877 204 ntBASIC24.19■■□□□ 1.46
Abca3Q8R420 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Abca3Q8R420 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Abca3Q8R420 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Abca3Q8R420 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Abca3Q8R420 AC163280.1-201ENSMUST00000228194 1100 ntBASIC24.18■■□□□ 1.46
Abca3Q8R420 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
Abca3Q8R420 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Abca3Q8R420 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Abca3Q8R420 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Abca3Q8R420 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Abca3Q8R420 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Abca3Q8R420 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Abca3Q8R420 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
Abca3Q8R420 Gm44549-201ENSMUST00000208351 577 ntBASIC24.18■■□□□ 1.46
Abca3Q8R420 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC24.18■■□□□ 1.46
Abca3Q8R420 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.18■■□□□ 1.46
Abca3Q8R420 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Abca3Q8R420 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Abca3Q8R420 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Abca3Q8R420 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Abca3Q8R420 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Abca3Q8R420 Gm26971-201ENSMUST00000182423 1072 ntBASIC24.17■■□□□ 1.46
Abca3Q8R420 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Abca3Q8R420 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms