Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slf1Q8R3P9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Slf1Q8R3P9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slf1Q8R3P9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slf1Q8R3P9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Slf1Q8R3P9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slf1Q8R3P9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.28■□□□□ 0.68
Slf1Q8R3P9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slf1Q8R3P9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slf1Q8R3P9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.27■□□□□ 0.68
Slf1Q8R3P9 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.27■□□□□ 0.68
Slf1Q8R3P9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.27■□□□□ 0.68
Slf1Q8R3P9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.27■□□□□ 0.68
Slf1Q8R3P9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slf1Q8R3P9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slf1Q8R3P9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slf1Q8R3P9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slf1Q8R3P9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slf1Q8R3P9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slf1Q8R3P9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slf1Q8R3P9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slf1Q8R3P9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slf1Q8R3P9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slf1Q8R3P9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slf1Q8R3P9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Slf1Q8R3P9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slf1Q8R3P9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slf1Q8R3P9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slf1Q8R3P9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms