Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup58Q8R332 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nup58Q8R332 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nup58Q8R332 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nup58Q8R332 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.41■□□□□ 0.86
Nup58Q8R332 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Nup58Q8R332 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.41■□□□□ 0.86
Nup58Q8R332 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.41■□□□□ 0.86
Nup58Q8R332 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup58Q8R332 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nup58Q8R332 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup58Q8R332 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nup58Q8R332 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup58Q8R332 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Nup58Q8R332 BC021767-201ENSMUST00000126387 1716 ntBASIC20.4■□□□□ 0.86
Nup58Q8R332 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup58Q8R332 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Nup58Q8R332 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup58Q8R332 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup58Q8R332 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup58Q8R332 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup58Q8R332 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup58Q8R332 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nup58Q8R332 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Nup58Q8R332 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup58Q8R332 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup58Q8R332 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nup58Q8R332 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Nup58Q8R332 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup58Q8R332 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Nup58Q8R332 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup58Q8R332 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup58Q8R332 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup58Q8R332 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nup58Q8R332 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.39■□□□□ 0.85
Nup58Q8R332 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup58Q8R332 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nup58Q8R332 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Nup58Q8R332 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nup58Q8R332 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nup58Q8R332 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nup58Q8R332 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup58Q8R332 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup58Q8R332 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Nup58Q8R332 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.37■□□□□ 0.85
Nup58Q8R332 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup58Q8R332 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup58Q8R332 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nup58Q8R332 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.36■□□□□ 0.85
Nup58Q8R332 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.36■□□□□ 0.85
Nup58Q8R332 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nup58Q8R332 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup58Q8R332 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup58Q8R332 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nup58Q8R332 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nup58Q8R332 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Nup58Q8R332 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Nup58Q8R332 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup58Q8R332 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup58Q8R332 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup58Q8R332 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Nup58Q8R332 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.35■□□□□ 0.85
Nup58Q8R332 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.35■□□□□ 0.85
Nup58Q8R332 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nup58Q8R332 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nup58Q8R332 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.35■□□□□ 0.85
Nup58Q8R332 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Nup58Q8R332 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup58Q8R332 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup58Q8R332 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Nup58Q8R332 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.34■□□□□ 0.85
Nup58Q8R332 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.34■□□□□ 0.85
Nup58Q8R332 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.34■□□□□ 0.85
Nup58Q8R332 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nup58Q8R332 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup58Q8R332 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup58Q8R332 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup58Q8R332 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup58Q8R332 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nup58Q8R332 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup58Q8R332 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nup58Q8R332 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.33■□□□□ 0.85
Nup58Q8R332 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup58Q8R332 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nup58Q8R332 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup58Q8R332 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup58Q8R332 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nup58Q8R332 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nup58Q8R332 Gm43137-201ENSMUST00000198052 594 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms