Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpp40Q8R1F9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.55■□□□□ 0.88
Rpp40Q8R1F9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpp40Q8R1F9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpp40Q8R1F9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rpp40Q8R1F9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpp40Q8R1F9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpp40Q8R1F9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.53■□□□□ 0.88
Rpp40Q8R1F9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpp40Q8R1F9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpp40Q8R1F9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpp40Q8R1F9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rpp40Q8R1F9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Gm7514-201ENSMUST00000209475 934 ntBASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpp40Q8R1F9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpp40Q8R1F9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpp40Q8R1F9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rpp40Q8R1F9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp40Q8R1F9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp40Q8R1F9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rpp40Q8R1F9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp40Q8R1F9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp40Q8R1F9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp40Q8R1F9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpp40Q8R1F9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpp40Q8R1F9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rpp40Q8R1F9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rpp40Q8R1F9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpp40Q8R1F9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rpp40Q8R1F9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.5■□□□□ 0.87
Rpp40Q8R1F9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rpp40Q8R1F9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Rpp40Q8R1F9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.5■□□□□ 0.87
Rpp40Q8R1F9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpp40Q8R1F9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rpp40Q8R1F9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpp40Q8R1F9 Gm13534-201ENSMUST00000121169 513 ntBASIC20.49■□□□□ 0.87
Rpp40Q8R1F9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.49■□□□□ 0.87
Rpp40Q8R1F9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.49■□□□□ 0.87
Rpp40Q8R1F9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpp40Q8R1F9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Gm37179-201ENSMUST00000194862 823 ntBASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rpp40Q8R1F9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rpp40Q8R1F9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp40Q8R1F9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp40Q8R1F9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp40Q8R1F9 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.47■□□□□ 0.87
Rpp40Q8R1F9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpp40Q8R1F9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms