Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lin28aQ8K3Y3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lin28aQ8K3Y3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lin28aQ8K3Y3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lin28aQ8K3Y3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lin28aQ8K3Y3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lin28aQ8K3Y3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lin28aQ8K3Y3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lin28aQ8K3Y3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Gm37179-201ENSMUST00000194862 823 ntBASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Lin28aQ8K3Y3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lin28aQ8K3Y3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Lin28aQ8K3Y3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lin28aQ8K3Y3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.85■□□□□ 0.45
Lin28aQ8K3Y3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lin28aQ8K3Y3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lin28aQ8K3Y3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lin28aQ8K3Y3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lin28aQ8K3Y3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Gm7514-201ENSMUST00000209475 934 ntBASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lin28aQ8K3Y3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lin28aQ8K3Y3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lin28aQ8K3Y3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lin28aQ8K3Y3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lin28aQ8K3Y3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Lin28aQ8K3Y3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lin28aQ8K3Y3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lin28aQ8K3Y3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.83■□□□□ 0.44
Lin28aQ8K3Y3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin28aQ8K3Y3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lin28aQ8K3Y3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin28aQ8K3Y3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin28aQ8K3Y3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lin28aQ8K3Y3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lin28aQ8K3Y3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lin28aQ8K3Y3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin28aQ8K3Y3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin28aQ8K3Y3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin28aQ8K3Y3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.81■□□□□ 0.44
Lin28aQ8K3Y3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lin28aQ8K3Y3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin28aQ8K3Y3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lin28aQ8K3Y3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lin28aQ8K3Y3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lin28aQ8K3Y3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms