Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vrk3Q8K3G5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Gm43137-201ENSMUST00000198052 594 ntBASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vrk3Q8K3G5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk3Q8K3G5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Gm13241-201ENSMUST00000094493 780 ntBASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk3Q8K3G5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk3Q8K3G5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms