Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Golph3-205ENSMUST00000228671 2842 ntBASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cchcr1Q8K2I2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cchcr1Q8K2I2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cchcr1Q8K2I2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 BC021767-201ENSMUST00000126387 1716 ntBASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Cchcr1Q8K2I2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cchcr1Q8K2I2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cchcr1Q8K2I2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cchcr1Q8K2I2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cchcr1Q8K2I2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Cchcr1Q8K2I2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cchcr1Q8K2I2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
Cchcr1Q8K2I2 Wdr70-203ENSMUST00000227371 1130 ntBASIC22.52■■□□□ 1.2
Cchcr1Q8K2I2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Cchcr1Q8K2I2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Cchcr1Q8K2I2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Mir7075-201ENSMUST00000184187 82 ntBASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cchcr1Q8K2I2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms