Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trnt1Q8K1J6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trnt1Q8K1J6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.47■□□□□ 0.55
Trnt1Q8K1J6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trnt1Q8K1J6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trnt1Q8K1J6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trnt1Q8K1J6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trnt1Q8K1J6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trnt1Q8K1J6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trnt1Q8K1J6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trnt1Q8K1J6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Trnt1Q8K1J6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trnt1Q8K1J6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trnt1Q8K1J6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trnt1Q8K1J6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.46■□□□□ 0.54
Trnt1Q8K1J6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trnt1Q8K1J6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trnt1Q8K1J6 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Gm43060-201ENSMUST00000200621 289 ntBASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trnt1Q8K1J6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms