Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Rtn1Q8K0T0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Gm7860-201ENSMUST00000121190 879 ntBASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtn1Q8K0T0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rtn1Q8K0T0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rtn1Q8K0T0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rtn1Q8K0T0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.08■■□□□ 1.13
Rtn1Q8K0T0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.08■■□□□ 1.13
Rtn1Q8K0T0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rtn1Q8K0T0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rtn1Q8K0T0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rtn1Q8K0T0 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 Gm9988-201ENSMUST00000069786 435 ntBASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtn1Q8K0T0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rtn1Q8K0T0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Rtn1Q8K0T0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.05■■□□□ 1.12
Rtn1Q8K0T0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
Rtn1Q8K0T0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Rtn1Q8K0T0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rtn1Q8K0T0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rtn1Q8K0T0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rtn1Q8K0T0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Gm38205-201ENSMUST00000192243 258 ntBASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtn1Q8K0T0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rtn1Q8K0T0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rtn1Q8K0T0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.03■■□□□ 1.12
Rtn1Q8K0T0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtn1Q8K0T0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtn1Q8K0T0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtn1Q8K0T0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rtn1Q8K0T0 Gm15039-201ENSMUST00000118914 875 ntBASIC22.02■■□□□ 1.12
Rtn1Q8K0T0 Gm10493-201ENSMUST00000097270 612 ntBASIC22.02■■□□□ 1.12
Rtn1Q8K0T0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.02■■□□□ 1.12
Rtn1Q8K0T0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Rtn1Q8K0T0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.02■■□□□ 1.12
Rtn1Q8K0T0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rtn1Q8K0T0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
Rtn1Q8K0T0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtn1Q8K0T0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms