Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Gm44549-201ENSMUST00000208351 577 ntBASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Rp1l1Q8CGM2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rp1l1Q8CGM2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.19■□□□□ 0.82
Rp1l1Q8CGM2 Gm43799-201ENSMUST00000201845 579 ntBASIC20.19■□□□□ 0.82
Rp1l1Q8CGM2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rp1l1Q8CGM2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rp1l1Q8CGM2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rp1l1Q8CGM2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rp1l1Q8CGM2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rp1l1Q8CGM2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.18■□□□□ 0.82
Rp1l1Q8CGM2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rp1l1Q8CGM2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rp1l1Q8CGM2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rp1l1Q8CGM2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rp1l1Q8CGM2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rp1l1Q8CGM2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.18■□□□□ 0.82
Rp1l1Q8CGM2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rp1l1Q8CGM2 Gm9987-201ENSMUST00000069768 567 ntBASIC20.18■□□□□ 0.82
Rp1l1Q8CGM2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rp1l1Q8CGM2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.17■□□□□ 0.82
Rp1l1Q8CGM2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.17■□□□□ 0.82
Rp1l1Q8CGM2 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.17■□□□□ 0.82
Rp1l1Q8CGM2 Gm13158-201ENSMUST00000122007 736 ntBASIC20.17■□□□□ 0.82
Rp1l1Q8CGM2 Gm18666-201ENSMUST00000190039 958 ntBASIC20.17■□□□□ 0.82
Rp1l1Q8CGM2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rp1l1Q8CGM2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rp1l1Q8CGM2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rp1l1Q8CGM2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rp1l1Q8CGM2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rp1l1Q8CGM2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Gm15378-201ENSMUST00000121894 207 ntBASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rp1l1Q8CGM2 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.14■□□□□ 0.82
Rp1l1Q8CGM2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Rp1l1Q8CGM2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rp1l1Q8CGM2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rp1l1Q8CGM2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rp1l1Q8CGM2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Rp1l1Q8CGM2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rp1l1Q8CGM2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 Gm10231-201ENSMUST00000181584 441 ntBASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms