Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gm27454-201ENSMUST00000185090 204 ntBASIC21.84■■□□□ 1.09
Smc2Q8CG48 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.84■■□□□ 1.09
Smc2Q8CG48 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Smc2Q8CG48 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Smc2Q8CG48 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smc2Q8CG48 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc2Q8CG48 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smc2Q8CG48 Gm11421-201ENSMUST00000122124 294 ntBASIC21.83■■□□□ 1.09
Smc2Q8CG48 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smc2Q8CG48 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.83■■□□□ 1.09
Smc2Q8CG48 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Smc2Q8CG48 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smc2Q8CG48 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc2Q8CG48 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc2Q8CG48 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc2Q8CG48 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc2Q8CG48 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc2Q8CG48 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc2Q8CG48 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc2Q8CG48 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc2Q8CG48 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc2Q8CG48 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smc2Q8CG48 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc2Q8CG48 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc2Q8CG48 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.81■■□□□ 1.08
Smc2Q8CG48 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc2Q8CG48 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc2Q8CG48 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc2Q8CG48 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc2Q8CG48 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Gm43173-201ENSMUST00000202246 593 ntBASIC21.8■■□□□ 1.08
Smc2Q8CG48 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc2Q8CG48 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smc2Q8CG48 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc2Q8CG48 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc2Q8CG48 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc2Q8CG48 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc2Q8CG48 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc2Q8CG48 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.77■■□□□ 1.08
Smc2Q8CG48 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc2Q8CG48 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smc2Q8CG48 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc2Q8CG48 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.76■■□□□ 1.07
Smc2Q8CG48 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.76■■□□□ 1.07
Smc2Q8CG48 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smc2Q8CG48 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc2Q8CG48 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.76■■□□□ 1.07
Smc2Q8CG48 Gm6139-201ENSMUST00000079261 882 ntBASIC21.76■■□□□ 1.07
Smc2Q8CG48 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smc2Q8CG48 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc2Q8CG48 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc2Q8CG48 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc2Q8CG48 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Smc2Q8CG48 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Smc2Q8CG48 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms