Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
Ccdc17Q8CE13 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Gm13168-201ENSMUST00000121771 632 ntBASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc17Q8CE13 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 Gm13146-201ENSMUST00000118508 780 ntBASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 Mir7071-201ENSMUST00000184847 69 ntBASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc17Q8CE13 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc17Q8CE13 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc17Q8CE13 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc17Q8CE13 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc17Q8CE13 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc17Q8CE13 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc17Q8CE13 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc17Q8CE13 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc17Q8CE13 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Gm7290-201ENSMUST00000104990 617 ntBASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Gm12918-201ENSMUST00000120234 636 ntBASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Gm15710-201ENSMUST00000121821 636 ntBASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Gm5075-201ENSMUST00000196916 622 ntBASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc17Q8CE13 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc17Q8CE13 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Gm20049-201ENSMUST00000219950 730 ntBASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc17Q8CE13 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Ccdc17Q8CE13 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc17Q8CE13 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms